I cannot answer the first question... but I will offer this:
A channel list is a channel list.
You should be able to import the Fortec *.cdf file into Channel Master, do whatever re-arranging, renaming, etc... then export it (or perhaps directly talk to the BEC?) in a format that the Coship accepts.
Unfortunately, Channel Master doesn't directly talk to the Lifetime
Classic NA, even if you have the correct (in this case, null modem) cable. Apparently, it's just enough different from the Ultra that it doesn't work.
...perhaps, in time, there'll be direct support in Channel Master for the Classic NA, then you won't have to up/download with the Fortec software and arrange/manage with the Channel Master software.